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The SKMT Algorithm: A method for assessing and comparing underlying protein entanglement (2023)
Journal Article
Bale, A., Rambo, R., & Prior, C. (2023). The SKMT Algorithm: A method for assessing and comparing underlying protein entanglement. PLoS Computational Biology, 19(11), Article e1011248. https://doi.org/10.1371/journal.pcbi.1011248

We present fast and simple-to-implement measures of the entanglement of protein tertiary structures which are appropriate for highly flexible structure comparison. These are performed using the SKMT algorithm, a novel method of smoothing the Cα backb... Read More about The SKMT Algorithm: A method for assessing and comparing underlying protein entanglement.

Pattern Formation in Mesic Savannas (2023)
Journal Article
Patterson, D., Levin, S., Staver, A. C., & Touboul, J. (2024). Pattern Formation in Mesic Savannas. Bulletin of Mathematical Biology, 86(1), https://doi.org/10.1007/s11538-023-01231-7

We analyze a spatially extended version of a well-known model of forest-savanna dynamics, which presents as a system of nonlinear partial integro-differential equations, and study necessary conditions for pattern-forming bifurcations. Homogeneous sol... Read More about Pattern Formation in Mesic Savannas.

3d exceptional gauge theories and boundary confinement (2023)
Journal Article
Okazaki, T., & Smith, D. J. (2023). 3d exceptional gauge theories and boundary confinement. Journal of High Energy Physics, 2023(11), Article 199. https://doi.org/10.1007/jhep11%282023%29199

We find boundary confining dualities of 3d N = 2 supersymmetric gauge theories with exceptional gauge groups. The half-indices which enumerate the boundary BPS local operators in the presence of Neumann and Dirichlet boundary conditions for gauge fie... Read More about 3d exceptional gauge theories and boundary confinement.

Emulating long-term weather-driven transportation earthworks deterioration models to support asset management (2023)
Journal Article
Helm, P., Svalova, A., Morsy, A., Rouainia, M., Smith, A., El-Hamalawi, A., …Glendinning, S. (2024). Emulating long-term weather-driven transportation earthworks deterioration models to support asset management. Transportation Geotechnics, 44, Article 101155. https://doi.org/10.1016/j.trgeo.2023.101155

The deterioration of transport infrastructure earthworks is a global problem, with negative impacts for infrastructure resilience, becoming of increasing significance as existing infrastructure ages. Key mechanisms which affect this deterioration inc... Read More about Emulating long-term weather-driven transportation earthworks deterioration models to support asset management.

Deciphering the Pre–solar-storm Features of the 2017 September Storm From Global and Local Dynamics (2023)
Journal Article
Raphaldini, B., Dikpati, M., Norton, A. A., Teruya, A. S. W., McIntosh, S. W., Prior, C. B., & MacTaggart, D. (2023). Deciphering the Pre–solar-storm Features of the 2017 September Storm From Global and Local Dynamics. Astrophysical Journal, 958(2), Article 175. https://doi.org/10.3847/1538-4357/acfef0

We investigate whether global toroid patterns and the local magnetic field topology of solar active region (AR) 12673 together can hindcast the occurrence of the biggest X-flares of solar cycle (SC)-24. Magnetic toroid patterns (narrow latitude belts... Read More about Deciphering the Pre–solar-storm Features of the 2017 September Storm From Global and Local Dynamics.

Spatial variation in the sensitivity of freshwater macroinvertebrate assemblages to chemical stressors (2023)
Journal Article
Liang, R., Sinclair, T. M., Craig, P. S., & Maltby, L. (2024). Spatial variation in the sensitivity of freshwater macroinvertebrate assemblages to chemical stressors. Water Research, 120854. https://doi.org/10.1016/j.watres.2023.120854

Assessing spatial variation in the chemical sensitivity of natural assemblages will enhance ecological relevance and reduce uncertainty in ecological risk assessments and the derivation of environmental quality standards (EQSs). Ho... Read More about Spatial variation in the sensitivity of freshwater macroinvertebrate assemblages to chemical stressors.

Two string theory flavours of generalised Eisenstein series (2023)
Journal Article
Dorigoni, D., & Treilis, R. (2023). Two string theory flavours of generalised Eisenstein series. Journal of High Energy Physics, 2023(11), Article 102. https://doi.org/10.1007/jhep11%282023%29102

Generalised Eisenstein series are non-holomorphic modular invariant functions of a complex variable, τ, subject to a particular inhomogeneous Laplace eigenvalue equation on the hyperbolic upper-half τ-plane. Two infinite classes of such functions ari... Read More about Two string theory flavours of generalised Eisenstein series.

A càdlàg rough path foundation for robust finance (2023)
Journal Article
Allan, A. L., Liu, C., & Prömel, D. J. (2024). A càdlàg rough path foundation for robust finance. Finance and Stochastics, 28(1), 215-257. https://doi.org/10.1007/s00780-023-00522-0

Using rough path theory, we provide a pathwise foundation for stochastic Itô integration which covers most commonly applied trading strategies and mathematical models of financial markets, including those under Knightian uncertainty. To this end, we... Read More about A càdlàg rough path foundation for robust finance.

The D 3 2 spin chain and its finite-size spectrum (2023)
Journal Article
Frahm, H., Gehrmann, S., Nepomechie, R. I., & Retore, A. L. (2023). The D 3 2 spin chain and its finite-size spectrum. Journal of High Energy Physics, 2023(11), Article 95. https://doi.org/10.1007/jhep11%282023%29095

Using the analytic Bethe ansatz, we initiate a study of the scaling limit of the quasi-periodic D32 spin chain. Supported by a detailed symmetry analysis, we determine the effective scaling dimensions of a large class of states in the parameter regim... Read More about The D 3 2 spin chain and its finite-size spectrum.