Materials Precursor Score: Modeling Chemists' Intuition for the Synthetic Accessibility of Porous Organic Cage Precursors

Bennett, Steven; Szczypiński, Filip T.; Turcani, Lukas; Briggs, Michael E.; Greenaway, Rebecca L.; Jelfs, Kim E.

Abstract

Computation is increasingly being used to try to accelerate the discovery of new materials. One specific example of this is porous molecular materials, specifically porous organic cages, where the porosity of the materials predominantly comes from the internal cavities of the molecules themselves. The computational discovery of novel structures with useful properties is currently hindered by the difficulty in transitioning from a computational prediction to synthetic realization. Attempts at experimental validation are often time-consuming, expensive, and frequently, the key bottleneck of material discovery. In this work, we developed a computational screening workflow for porous molecules that includes consideration of the synthetic difficulty of material precursors, aimed at easing the transition between computational prediction and experimental realization. We trained a machine learning model by first collecting data on 12,553 molecules categorized either as "easy-to-synthesize"or "difficult-to-synthesize"by expert chemists with years of experience in organic synthesis. We used an approach to address the class imbalance present in our data set, producing a binary classifier able to categorize easy-to-synthesize molecules with few false positives. We then used our model during computational screening for porous organic molecules to bias toward precursors whose easier synthesis requirements would make them promising candidates for experimental realization and material development. We found that even by limiting precursors to those that are easier-to-synthesize, we are still able to identify cages with favorable, and even some rare, properties.

Citation

Bennett, S., Szczypiński, F. T., Turcani, L., Briggs, M. E., Greenaway, R. L., & Jelfs, K. E. (2021). Materials Precursor Score: Modeling Chemists' Intuition for the Synthetic Accessibility of Porous Organic Cage Precursors. Journal of Chemical Information and Modeling, 61(9), 4342-4356. https://doi.org/10.1021/acs.jcim.1c00375

• Journal Article Type: Article
• Acceptance Date: Aug 1, 2021
• Online Publication Date: Aug 13, 2021
• Publication Date: Sep 27, 2021
• Deposit Date: Feb 19, 2025
• Journal: Journal of Chemical Information and Modeling
• Print ISSN: 1549-9596
• Electronic ISSN: 1549-960X
• Publisher: American Chemical Society
• Peer Reviewed: Peer Reviewed
• Volume: 61
• Issue: 9
• Pages: 4342-4356
• DOI: https://doi.org/10.1021/acs.jcim.1c00375
• Public URL: https://durham-repository.worktribe.com/output/3490169