All Outputs (5)

Specific suppression of long terminal repeat retrotransposon mobilization in plants (2022)
Journal Article
Brestovitsky, A., Iwasaki, M., Cho, J., Adulyanukosol, N., Paszkowski, J., & Catoni, M. (2023). Specific suppression of long terminal repeat retrotransposon mobilization in plants. Plant Physiology, 191(4), 2245-2255. https://doi.org/10.1093/plphys/kiac605

The tissue culture passage necessary for the generation of transgenic plants induces genome instability. This instability predominantly involves the uncontrolled mobilization of LTR retrotransposons (LTR-TEs), which are the most abundant class of mob... Read More about Specific suppression of long terminal repeat retrotransposon mobilization in plants.

m6A RNA methylation impairs gene expression variability and reproductive thermotolerance in Arabidopsis (2022)
Journal Article
Wang, L., Zhuang, H., Fan, W., Zhang, X., Dong, H., Yang, H., & Cho, J. (2022). m6A RNA methylation impairs gene expression variability and reproductive thermotolerance in Arabidopsis. Genome Biology, 23(1), Article 244. https://doi.org/10.1186/s13059-022-02814-8

Amplification of LTRs of extrachromosomal linear DNAs (ALE-seq) identifies two active Oryco LTR retrotransposons in the rice cultivar Dongjin (2022)
Journal Article
Koo, H., Kim, S., Park, H., Lee, S., Paek, N., Cho, J., & Yang, T. (2022). Amplification of LTRs of extrachromosomal linear DNAs (ALE-seq) identifies two active Oryco LTR retrotransposons in the rice cultivar Dongjin. Mobile DNA, 13(1), Article 18. https://doi.org/10.1186/s13100-022-00274-2

Long terminal repeat retrotransposons (LTR-RTs) make up a considerable portion of plant genomes. New insertions of these active LTR-RTs modify gene structures and functions and play an important role in genome evolution. Therefore, identifying active... Read More about Amplification of LTRs of extrachromosomal linear DNAs (ALE-seq) identifies two active Oryco LTR retrotransposons in the rice cultivar Dongjin.

Small regulatory RNAs in rice epigenetic regulation (2022)
Journal Article
Park, S. Y., Cho, J., & Jeong, D. (2022). Small regulatory RNAs in rice epigenetic regulation. Biochemical Society Transactions, 50(3), 1215-1225. https://doi.org/10.1042/bst20210336

Plant small RNAs (sRNAs) are short non-coding RNAs that are implicated in various regulatory processes involving post-transcriptional gene silencing and epigenetic gene regulation. In epigenetic regulation, sRNAs are primarily involved in RNA-directe... Read More about Small regulatory RNAs in rice epigenetic regulation.

Tracing Mobile DNAs: From Molecular to Population Scales (2022)
Journal Article
Fan, W., Wang, L., Chu, J., Li, H., Kim, E. Y., & Cho, J. (2022). Tracing Mobile DNAs: From Molecular to Population Scales. Frontiers in Plant Science, 13, Article 837378. https://doi.org/10.3389/fpls.2022.837378

Transposable elements (TEs, transposons) are mobile DNAs that are prevalent in most eukaryotic genomes. In plants, their mobility has vastly contributed to genetic diversity which is essential for adaptive changes and evolution of a species. Such mob... Read More about Tracing Mobile DNAs: From Molecular to Population Scales.