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Bayesian emulation of computer experiments of infrastructure slope stability models (2022)
Presentation / Conference Contribution
Svalova, A., Helm, P., Prangle, D., Rouainia, M., Glendinning, S., & Wilkinson, D. (2022). Bayesian emulation of computer experiments of infrastructure slope stability models. In Proceedings of the 8th International Symposium on Geotechnical Safety and Risk (ISGSR). https://doi.org/10.3850/978-981-18-5182-7_00-07-011.xml

We performed a fully-Bayesian Gaussian process emulation and sensitivity analysis of a numerical model that simulates transport cutting slope deterioration. In the southern UK, a significant proportion of transport infrastructure is built in overcons... Read More about Bayesian emulation of computer experiments of infrastructure slope stability models.

MGnify: the microbiome sequence data analysis resource in 2023 (2022)
Journal Article
Richardson, L., Allen, B., Baldi, G., Beracochea, M., Bileschi, M., Burdett, T., …Finn, R. (2023). MGnify: the microbiome sequence data analysis resource in 2023. Nucleic Acids Research, 51(D1), D753-D759. https://doi.org/10.1093/nar/gkac1080

The MGnify platform (https://www.ebi.ac.uk/metagenomics) facilitates the assembly, analysis and archiving of microbiome-derived nucleic acid sequences. The platform provides access to taxonomic assignments and functional annotations for nearly half a... Read More about MGnify: the microbiome sequence data analysis resource in 2023.

A sparse Bayesian hierarchical vector autoregressive model for microbial dynamics in a wastewater treatment plant (2022)
Journal Article
Hannaford, N., Heaps, S., Nye, T., Curtis, T., Allen, B., Golightly, A., & Wilkinson, D. (2023). A sparse Bayesian hierarchical vector autoregressive model for microbial dynamics in a wastewater treatment plant. Computational Statistics & Data Analysis, 179, https://doi.org/10.1016/j.csda.2022.107659

Proper function of a wastewater treatment plant (WWTP) relies on maintaining a delicate balance between a multitude of competing microorganisms. Gaining a detailed understanding of the complex network of interactions therein is essential to maximisin... Read More about A sparse Bayesian hierarchical vector autoregressive model for microbial dynamics in a wastewater treatment plant.